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Living with Multiple congenital anomalies-hypotonia-seizures syndrome 2

A genetic condition that mostly affects boys, with distinctive facial features, low muscle tone, seizures, and severe developmental delay.

Understanding Multiple congenital anomalies-hypotonia-seizures syndrome 2

Multiple congenital anomalies-hypotonia-seizures syndrome 2 (MCAHS2) is a genetic neurodevelopmental condition caused by changes in the PIGA gene on the X chromosome.

Features include distinctive facial features, low muscle tone at birth, and myoclonic seizures (jerks or twitches of the upper body, arms, or legs). Other problems can involve the brain, heart, and urinary system. Symptoms and severity vary, but most children have severe developmental delay and intellectual disability. Signs are seen during pregnancy, at birth, or in infancy.

Signs & symptoms

Symptoms vary from person to person. GARD lists these among the most common:

  • Low muscle tone at birth (hypotonia)
  • Myoclonic seizures
  • Severe developmental delay
  • Absent speech
  • Differences in brain white matter
  • Heart differences, such as a hole between the upper chambers

Not everyone has every symptom. GARD's list comes from the Human Phenotype Ontology.

Diagnosis

  1. Talk with your doctor

    Share the symptoms you've noticed, when they started and your family health history. Notes and photos can help.

  2. See a specialist

    Specialists who may be involved include brain and nervous system specialists, genetic specialists and seizure and epilepsy specialists.

  3. Consider genetic testing

    Changes in PIGA are linked to this condition. Genetic testing and counseling can help confirm a diagnosis and explain what it means for your family.

  4. Connect with expert centers

    Epilepsy Foundation may keep lists of experts for this condition.

Care & treatment

Care team
Brain and nervous system specialists (neurologists); Genetic specialists (geneticists); Seizure and epilepsy specialists (epileptologist)
Expert care
Expert lists: Epilepsy Foundation
Treatment
GARD doesn't list specific treatments for this condition. Your care team will tailor care to your symptoms.
Research
Clinical trials and observational studies may be options. See the research section below.

General information, not medical advice. Your care team makes the decisions.

Everyday life

Living with a rare condition is easier with support.

  • Connect with Epilepsy Foundation
  • Keep notes on symptoms, changes and questions for appointments
  • Ask about patient registries that help research
  • Look into financial aid and travel resources for care visits
Bring these questions to your next doctor visit
Can genetic testing for the PIGA gene confirm this diagnosis?
What seizure treatments are available?
Which specialists should follow the brain, heart, and urinary system?

Quick facts

Symptoms usually startduring Pregnancy, at Birth, and as an Infant
InheritanceX-Linked
GenesPIGA

This condition is caused by changes in the PIGA gene on the X chromosome. It is X-linked recessive, so it typically affects boys. In some cases it results from a new gene change that was not inherited from a parent.

GeneticNeurologicalInherited Metabolic

Also known as: dee20; developmental and epileptic encephalopathy 20; epileptic encephalopathy, early infantile, 20; glycosylphosphatidylinositol biosynthesis defect 4; gpibd4; mcahs type 2

Patient organizations

Broader rare-disease groups

Source: NIH GARD · Multiple congenital anomalies-hypotonia-seizures syndrome 2GARD ID 12777 · GARD page updated September 2026 · Plain-language summary by Know Rare; editorial review pending. General information, not medical advice.

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